STRINGSTRING
Psed_4502 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4502" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4502Hypothetical protein (410 aa)    
Predicted Functional Partners:
Psed_4503
Phosphonate-transporting ATPase (242 aa)
  0.999
Psed_1540
Phosphonate-transporting ATPase (258 aa)
  0.989
Psed_5703
Phosphonate-transporting ATPase (246 aa)
  0.984
Psed_4504
RND family efflux transporter MFP subunit (484 aa)
 
          0.971
Psed_1933
Phosphonate-transporting ATPase (226 aa)
  0.970
Psed_4501
Secretion protein HlyD family protein (787 aa)
 
          0.968
Psed_4500
Oxygen-independent coproporphyrinogen III oxidase (406 aa)
              0.867
Psed_6642
Fe(3+)-transporting ATPase (356 aa)
 
  0.856
Psed_6193
Xenobiotic-transporting ATPase (630 aa)
   
 
  0.820
Psed_5110
Xenobiotic-transporting ATPase (1286 aa)
   
 
  0.820
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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