STRINGSTRING
Psed_4506 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4506" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4506Hypothetical protein (58 aa)    
Predicted Functional Partners:
Psed_4507
Adenylylsulfate reductase; Reduction of activated sulfate into sulfite (234 aa)
              0.884
Psed_4508
Sulfate adenylyltransferase small subunit (300 aa)
              0.878
Psed_4509
Sulfate adenylyltransferase large subunit; May be the GTPase, regulating ATP sulfurylase activity (449 aa)
              0.876
Psed_4505
Sulfite reductase (ferredoxin) (559 aa)
              0.781
Psed_4510
Aliphatic sulfonate ABC transporter substrate-binding protein (365 aa)
 
          0.777
Psed_2762
Hypothetical protein (465 aa)
   
          0.683
Psed_4513
Cobalamin (vitamin B12) biosynthesis CbiX protein (250 aa)
              0.665
Psed_5108
Hypothetical protein (182 aa)
   
          0.663
Psed_3412
Hypothetical protein (129 aa)
   
          0.654
Psed_2715
Sporulation and cell division protein SsgA (136 aa)
   
          0.627
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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