STRINGSTRING
Psed_4522 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4522" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4522Hypothetical protein (197 aa)    
Predicted Functional Partners:
Psed_0257
Hypothetical protein (372 aa)
   
          0.687
Psed_5949
Hypothetical protein (429 aa)
   
          0.684
Psed_0314
Hypothetical protein (239 aa)
   
          0.679
Psed_4523
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form (282 aa)
              0.645
Psed_5947
Oxidoreductase molybdopterin binding protein (396 aa)
   
          0.642
Psed_0401
Type II secretion system F domain-containing protein (243 aa)
   
          0.580
Psed_5940
UDP-glucose 4-epimerase (351 aa)
   
          0.569
Psed_1852
Lipoprotein (518 aa)
   
          0.553
Psed_3442
Hypothetical protein (388 aa)
   
          0.551
Psed_0972
Hypothetical protein (423 aa)
   
          0.539
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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