STRINGSTRING
Psed_4524 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4524" - Barnase inhibitor protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4524Barnase inhibitor protein (120 aa)    
Predicted Functional Partners:
Psed_4525
Guanine-specific ribonuclease N1 and T1 (148 aa)
 
          0.879
Psed_5297
Hypothetical protein (358 aa)
   
          0.620
Psed_4526
Hypothetical protein (85 aa)
              0.508
Psed_6542
Hypothetical protein (220 aa)
   
          0.488
Psed_6506
Major facilitator superfamily protein (409 aa)
   
          0.460
Psed_0142
RecB family nuclease (585 aa)
   
          0.447
Psed_2768
Metallophosphoesterase (262 aa)
   
          0.440
Psed_0165
Hypothetical protein (294 aa)
   
          0.440
Psed_6562
Hypothetical protein (1018 aa)
   
          0.439
Psed_4527
Alcohol dehydrogenase (321 aa)
              0.423
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (8%) [HD]