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Psed_4537 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4537" - 3-methyl-adenine DNA glycosylase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_45373-methyl-adenine DNA glycosylase (340 aa)    
Predicted Functional Partners:
Psed_0969
DNA repair protein and transcriptional regulator (514 aa)
 
 
  0.918
Psed_5310
Exodeoxyribonuclease III (268 aa)
   
  0.854
Psed_1105
Exodeoxyribonuclease III (289 aa)
   
  0.854
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (347 aa)
     
 
  0.663
Psed_3588
DNA polymerase I (939 aa)
   
 
  0.641
sbcC
Exonuclease SbcC; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (1107 aa)
 
 
  0.574
Psed_2003
Alkylated DNA repair protein (205 aa)
   
   
  0.529
Psed_5440
Hypothetical protein (383 aa)
   
          0.524
Psed_4538
Hypothetical protein (207 aa)
              0.523
Psed_3855
Sulfate-transporting ATPase (967 aa)
 
     
  0.508
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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