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Psed_4573 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4573" - RDD domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4573RDD domain-containing protein (157 aa)    
Predicted Functional Partners:
Psed_2756
Cytochrome c class I (286 aa)
   
          0.759
Psed_4574
Glutamine synthetase (473 aa)
              0.738
Psed_4809
Cytochrome c oxidase caa3-type, assembly factor CtaG-like protein (726 aa)
   
          0.731
Psed_2755
Rieske (2Fe-2S) domain-containing protein (378 aa)
   
          0.722
Psed_3357
Hypothetical protein (288 aa)
   
          0.683
Psed_0161
Abortive infection protein (272 aa)
   
          0.668
Psed_2754
Cytochrome b/b6 domain-containing protein (561 aa)
   
          0.654
Psed_3403
Cytochrome oxidase assembly (350 aa)
   
          0.633
Psed_3410
OpcA protein (317 aa)
   
          0.602
Psed_5171
Hypothetical protein (168 aa)
   
          0.601
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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