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Psed_4578 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4578" - stearoyl-CoA 9-desaturase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4578stearoyl-CoA 9-desaturase (315 aa)    
Predicted Functional Partners:
Psed_4005
Carbamoyl-phosphate synthase L chain ATP-binding protein (1086 aa)
     
   
  0.661
Psed_4577
Cold-shock protein DNA-binding protein (66 aa)
              0.644
Psed_3979
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (551 aa)
     
        0.577
Psed_4698
Amine oxidase (429 aa)
 
        0.545
Psed_4700
Cyclopropane-fatty-acyl-phospholipid synthase (418 aa)
 
        0.504
Psed_4576
TetR family transcriptional regulator (257 aa)
              0.468
Psed_5678
Type I phosphodiesterase/nucleotide pyrophosphatase (381 aa)
   
        0.438
Psed_3904
CO dehydrogenase maturation factor-like protein (316 aa)
   
          0.438
Psed_4701
Cyclopropane-fatty-acyl-phospholipid synthase (458 aa)
   
        0.428
Psed_2919
Cyclopropane-fatty-acyl-phospholipid synthase (413 aa)
   
        0.428
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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