STRINGSTRING
Psed_4582 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4582" - Acriflavin resistance protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4582Acriflavin resistance protein (1275 aa)    
Predicted Functional Partners:
Psed_3582
Preprotein translocase subunit YajC (171 aa)
   
 
      0.800
Psed_4583
Hypothetical protein (142 aa)
              0.617
Psed_3552
TetR family transcriptional regulator (206 aa)
 
     
  0.599
Psed_4584
Hypothetical protein (235 aa)
              0.573
Psed_5236
TetR family transcriptional regulator (255 aa)
 
     
  0.564
Psed_0525
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (761 aa)
   
   
  0.554
Psed_4312
TetR family transcriptional regulator (202 aa)
   
   
  0.510
Psed_1295
TetR family transcriptional regulator (205 aa)
   
   
  0.510
Psed_6398
TetR family transcriptional regulator (196 aa)
         
  0.498
Psed_5885
TetR family transcriptional regulator (198 aa)
         
  0.498
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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