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Psed_4613 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4613" - Hypothetical protein in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Psed_4613Hypothetical protein (391 aa)    
Predicted Functional Partners:
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (438 aa)
 
 
  0.912
Psed_1679
ATP synthase subunit c (91 aa)
   
 
  0.898
Psed_6689
Hypothetical protein (365 aa)
   
   
 
0.816
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (397 aa)
   
 
  0.783
Psed_5464
Preprotein translocase subunit SecE (114 aa)
   
 
  0.771
Psed_2978
RpoD subfamily RNA polymerase sigma-70 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (348 aa)
 
 
  0.744
Psed_2808
Polypeptide-transport-associated domain-containing protein (460 aa)
     
 
  0.730
Psed_2755
Rieske (2Fe-2S) domain-containing protein (378 aa)
   
   
  0.716
rpsP
30S ribosomal protein S16 (147 aa)
 
   
  0.698
atpB
ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (244 aa)
 
 
  0.696
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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