STRINGSTRING
Psed_4619 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4619" - DNA-(apurinic or apyrimidinic site) lyase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4619DNA-(apurinic or apyrimidinic site) lyase (282 aa)    
Predicted Functional Partners:
Psed_1911
DNA-(apurinic or apyrimidinic site) lyase (278 aa)
   
   
 
0.852
Psed_3588
DNA polymerase I (939 aa)
   
   
  0.813
Psed_2017
DNA-formamidopyrimidine glycosylase (268 aa)
   
          0.727
Psed_4603
DEAD/H associated domain-containing protein (1590 aa)
 
        0.613
Psed_6107
HhH-GPD family protein (294 aa)
   
 
  0.568
Psed_2166
Ribose-phosphate pyrophosphokinase (330 aa)
     
 
  0.558
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of ribose 1,5-bisphosphate. Catalyzes the transfer of pyrophosphoryl group from ATP to ribose- 5-phosphate to yield phosphoribosyl diphosphate (PRPP) and AMP (326 aa)
     
 
  0.558
Psed_3283
5’-3’ exonuclease (312 aa)
   
   
  0.557
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (301 aa)
   
   
  0.545
dnaE2
Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase (1142 aa)
     
 
  0.544
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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