STRINGSTRING
Psed_4681 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4681" - Intradiol ring-cleavage dioxygenase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4681Intradiol ring-cleavage dioxygenase (270 aa)    
Predicted Functional Partners:
Psed_3035
3-oxoacid CoA-transferase subunit A (482 aa)
   
   
  0.737
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction- proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as ’pretransfer’ editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated ’posttransfer’ editing and involves dea [...] (577 aa)
              0.590
Psed_6063
Muconolactone delta-isomerase (95 aa)
   
   
  0.555
Psed_3095
Muconolactone Delta-isomerase (94 aa)
   
   
  0.555
Psed_0763
Muconolactone delta-isomerase (91 aa)
   
   
  0.555
Psed_4715
Hypothetical protein (212 aa)
   
          0.548
Psed_0720
Hypothetical protein (223 aa)
   
          0.532
Psed_6460
Carboxymuconolactone decarboxylase (128 aa)
   
   
  0.508
Psed_3744
Carboxymuconolactone decarboxylase (146 aa)
   
   
  0.508
Psed_1521
Carboxymuconolactone decarboxylase (134 aa)
   
   
  0.508
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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