STRINGSTRING
Psed_4708 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4708" - GCN5-like N-acetyltransferase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4708GCN5-like N-acetyltransferase (277 aa)    
Predicted Functional Partners:
Psed_2758
Hypothetical protein (182 aa)
   
        0.766
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (380 aa)
   
        0.750
Psed_6671
Major facilitator superfamily protein (452 aa)
 
          0.735
Psed_1293
Major facilitator superfamily protein (450 aa)
 
          0.735
Psed_1783
vitamin-B12 independent methionine synthase (421 aa)
   
        0.716
Psed_1119
Hypothetical protein (346 aa)
   
          0.681
Psed_1528
Anti-sigma factor (150 aa)
   
          0.666
Psed_5709
Hypothetical protein (101 aa)
   
          0.662
Psed_4707
Penicillin-binding protein transpeptidase (621 aa)
              0.660
Psed_4711
Peptidase M50 (398 aa)
   
        0.647
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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