STRINGSTRING
Psed_4724 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4724" - Type 11 methyltransferase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4724Type 11 methyltransferase (254 aa)    
Predicted Functional Partners:
Psed_4725
Phosphatidate cytidylyltransferase (287 aa)
              0.866
Psed_0165
Hypothetical protein (294 aa)
   
          0.696
Psed_5168
Hypothetical protein (197 aa)
   
          0.695
Psed_3174
Hypothetical protein (219 aa)
   
          0.615
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another (185 aa)
              0.612
Psed_4727
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (252 aa)
              0.525
Psed_0142
RecB family nuclease (585 aa)
   
          0.525
tsf
Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (275 aa)
              0.491
Psed_0710
Flavodoxin/nitric oxide synthase (181 aa)
   
          0.490
Psed_4870
Penicillin-binding protein transpeptidase (970 aa)
   
          0.479
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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