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Psed_4731 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4731" - RNA polymerase sigma 28 subunit FliA/WhiG in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4731RNA polymerase sigma 28 subunit FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (429 aa)    
Predicted Functional Partners:
Psed_2311
Chemotaxis protein CheB (352 aa)
 
   
  0.887
Psed_0085
Chemotaxis protein CheB (335 aa)
 
   
  0.881
xerC
Tyrosine recombinase xerC (310 aa)
         
  0.881
Psed_1528
Anti-sigma factor (150 aa)
   
 
  0.799
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1300 aa)
       
 
  0.774
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1175 aa)
       
 
  0.762
Psed_5134
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase (925 aa)
 
   
  0.750
Psed_0440
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase (734 aa)
 
   
  0.745
Psed_4081
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase (714 aa)
 
   
  0.729
Psed_0469
Diguanylate cyclase (286 aa)
 
   
  0.729
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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