STRINGSTRING
Psed_4735 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4735" - Hypothetical protein in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4735Hypothetical protein (118 aa)    
Predicted Functional Partners:
Psed_4734
Mg chelatase subunit ChlI (503 aa)
 
        0.971
Psed_1225
DNA protecting protein DprA (292 aa)
 
        0.741
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (265 aa)
   
      0.692
Psed_4733
DNA protecting protein DprA (396 aa)
 
        0.665
Psed_4736
Hypothetical protein (107 aa)
   
        0.655
Psed_4738
Signal peptidase I (430 aa)
   
        0.654
Psed_5181
Phosphoribosyltransferase (267 aa)
 
        0.580
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (119 aa)
              0.559
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (261 aa)
              0.518
Psed_1338
LysR family transcriptional regulator (303 aa)
 
      0.474
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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