STRINGSTRING
Psed_4779 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4779" - NADH dehydrogenase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4779NADH dehydrogenase (quinone) (508 aa)    
Predicted Functional Partners:
Psed_4780
NADH-ubiquinone oxidoreductase subunit 4L (156 aa)
 
   
  0.989
Psed_4776
Monovalent cation/proton antiporter subunit MnhG/PhaG (125 aa)
 
          0.947
Psed_4777
Hypothetical protein (88 aa)
 
   
  0.930
Psed_4778
Cation antiporter (182 aa)
 
          0.898
Psed_0760
NADH dehydrogenase (ubiquinone) 30 kDa subunit (504 aa)
 
   
  0.879
Psed_5558
Proton-translocating NADH-quinone oxidoreductase subunit L (652 aa)
 
 
0.737
Psed_0755
NADH ubiquinone oxidoreductase 20 kDa subunit (161 aa)
 
   
  0.675
Psed_4775
Transferase (174 aa)
         
  0.629
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (226 aa)
              0.627
nuoH
NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone (431 aa)
 
   
  0.625
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (6%) [HD]