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Psed_4798 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4798" - Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4798Pyridoxamine 5’-phosphate oxidase-related FMN-binding protein (246 aa)    
Predicted Functional Partners:
Psed_4800
Mechanosensitive ion channel MscS (342 aa)
              0.734
Psed_4799
Prolyl oligopeptidase (709 aa)
              0.731
Psed_4797
Isochorismatase hydrolase (200 aa)
              0.722
Psed_5855
GntR family transcriptional regulator (467 aa)
 
          0.687
Psed_0477
GntR family transcriptional regulator (477 aa)
 
          0.684
Psed_4801
Globin (126 aa)
              0.569
Psed_4802
Alpha amylase (519 aa)
              0.445
Psed_6682
GntR family transcriptional regulator (501 aa)
              0.412
Psed_6011
GntR family transcriptional regulator (413 aa)
              0.412
Psed_5459
GntR family transcriptional regulator (490 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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