STRINGSTRING
Psed_4800 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4800" - Mechanosensitive ion channel MscS in Pseudonocardia dioxanivorans
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4800Mechanosensitive ion channel MscS (342 aa)    
Predicted Functional Partners:
Psed_4799
Prolyl oligopeptidase (709 aa)
              0.875
Psed_4801
Globin (126 aa)
              0.737
Psed_4798
Pyridoxamine 5’-phosphate oxidase-related FMN-binding protein (246 aa)
              0.734
Psed_4754
Nitrogen regulatory protein P-II (112 aa)
     
      0.636
Psed_4753
Nitrogen regulatory protein P-II (127 aa)
     
      0.636
Psed_4751
Nitrogen regulatory protein P-II (112 aa)
     
      0.636
Psed_4797
Isochorismatase hydrolase (200 aa)
   
        0.632
Psed_4802
Alpha amylase (519 aa)
   
        0.567
Psed_1891
Aminopeptidase (863 aa)
 
        0.514
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (307 aa)
   
        0.430
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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