STRINGSTRING
Psed_4811 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4811" - N-6 DNA methylase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4811N-6 DNA methylase (585 aa)    
Predicted Functional Partners:
Psed_4810
Ser/Thr phosphatase (274 aa)
              0.659
Psed_4390
Hypothetical protein (371 aa)
   
          0.659
Psed_3965
Expression regulator (390 aa)
   
          0.658
Psed_4809
Cytochrome c oxidase caa3-type, assembly factor CtaG-like protein (726 aa)
 
          0.657
Psed_3558
PucR family transcriptional regulator (375 aa)
   
          0.614
Psed_0268
Isoquinoline 1-oxidoreductase (778 aa)
 
          0.605
Psed_1260
DEAD/DEAH box helicase domain-containing protein (1170 aa)
 
          0.599
Psed_5544
Hypothetical protein (185 aa)
   
          0.596
Psed_0933
Pyridoxamine 5’-phosphate oxidase-related FMN-binding protein (151 aa)
   
          0.588
Psed_5646
Heat shock protein 90 (997 aa)
   
          0.558
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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