STRINGSTRING
Psed_4823 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4823" - Winged helix family two component transcriptional regulator in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4823Winged helix family two component transcriptional regulator (241 aa)    
Predicted Functional Partners:
Psed_4822
Histidine kinase (470 aa)
  0.998
Psed_0786
Histidine kinase (487 aa)
  0.985
Psed_0995
Histidine kinase (439 aa)
 
  0.931
Psed_6021
Histidine kinase (461 aa)
 
  0.928
Psed_5639
Histidine kinase (406 aa)
 
  0.905
Psed_5029
Histidine kinase (506 aa)
 
  0.899
Psed_5183
Histidine kinase (596 aa)
 
  0.887
Psed_1863
Histidine kinase (523 aa)
 
 
  0.880
Psed_5945
Histidine kinase (348 aa)
          0.867
Psed_0785
Winged helix family two component transcriptional regulator (233 aa)
   
   
 
0.813
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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