STRINGSTRING
Psed_4827 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4827" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4827Hypothetical protein (445 aa)    
Predicted Functional Partners:
Psed_4826
Phosphoesterase PA-phosphatase-like protein (263 aa)
              0.859
Psed_4825
Hypothetical protein (351 aa)
              0.859
Psed_2109
Hypothetical protein (414 aa)
   
          0.770
Psed_1873
ATP-grasp enzyme-like protein (420 aa)
   
          0.686
Psed_0574
Polysaccharide deacetylase (735 aa)
              0.566
Psed_0571
Polysaccharide deacetylase (899 aa)
              0.566
Psed_4547
Asparagine synthase (637 aa)
 
          0.531
Psed_5919
Polysaccharide deacetylase (265 aa)
              0.412
Psed_5692
Polysaccharide deacetylase (255 aa)
              0.412
Psed_5083
Polysaccharide deacetylase (261 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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