STRINGSTRING
Psed_4832 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4832" - Peptidase M75, Imelysin in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4832Peptidase M75, Imelysin (389 aa)    
Predicted Functional Partners:
Psed_4831
Tat-translocated protein (450 aa)
 
   
  0.985
Psed_4833
Iron permease (286 aa)
     
  0.961
Psed_0894
Tat-translocated protein (415 aa)
 
   
  0.898
Psed_0889
Tat-translocated protein (438 aa)
 
   
  0.898
Psed_0891
Iron permease (273 aa)
     
  0.881
Psed_0892
Iron permease (277 aa)
     
  0.877
Psed_2053
Dyp-type peroxidase protein (338 aa)
   
   
  0.529
Psed_4834
Penicillinase repressor (135 aa)
              0.472
Psed_4835
Peptidase M48 Ste24p (303 aa)
              0.462
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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