STRINGSTRING
Psed_4837 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4837" - Hypothetical protein in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4837Hypothetical protein (152 aa)    
Predicted Functional Partners:
Psed_2291
Pyridoxamine 5’-phosphate oxidase-related FMN-binding protein (140 aa)
   
          0.734
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction (351 aa)
              0.640
Psed_1981
Cupin (116 aa)
   
          0.570
Psed_4839
Phosphoketolase (784 aa)
              0.536
Psed_4809
Cytochrome c oxidase caa3-type, assembly factor CtaG-like protein (726 aa)
   
          0.496
Psed_4841
UspA domain-containing protein (289 aa)
 
          0.496
Psed_2433
DoxX family protein (202 aa)
   
          0.488
Psed_5166
Hypothetical protein (125 aa)
   
          0.475
Psed_4633
Cupin (132 aa)
   
          0.466
Psed_1577
Glyoxalase/bleomycin resistance protein/dioxygenase (133 aa)
   
          0.430
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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