STRINGSTRING
Psed_4885 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4885" - Integrase catalytic subunit in Pseudonocardia dioxanivorans
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4885Integrase catalytic subunit (367 aa)    
Predicted Functional Partners:
Psed_3799
Formamidase (415 aa)
              0.635
Psed_4883
FmdB family regulatory protein (94 aa)
              0.571
Psed_4886
LuxR family transcriptional regulator (225 aa)
              0.529
Psed_2726
Cobalamin (vitamin B12) biosynthesis protein CbiG (129 aa)
   
          0.433
Psed_6352
Plasmid pRiA4b ORF-3 family protein (197 aa)
 
          0.424
Psed_6352
Plasmid pRiA4b ORF-3 family protein (197 aa)
 
          0.424
Psed_4882
Hypothetical protein (219 aa)
              0.422
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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