STRINGSTRING
Psed_4972 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4972" - Biotin/lipoyl attachment domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4972Biotin/lipoyl attachment domain-containing protein (79 aa)    
Predicted Functional Partners:
Psed_4974
Pyruvate dehydrogenase (337 aa)
 
          0.915
Psed_4973
Pyruvate dehydrogenase (326 aa)
              0.860
Psed_4971
Glyoxalase/bleomycin resistance protein/dioxygenase (178 aa)
              0.859
Psed_4970
Type 11 methyltransferase (277 aa)
              0.779
Psed_4969
Hydroxyquinol 1,2-dioxygenase (287 aa)
              0.531
Psed_2074
Pyruvate dehydrogenase (321 aa)
 
          0.478
Psed_3708
Pyruvate dehydrogenase (334 aa)
 
          0.465
Psed_4968
formyl-CoA transferase (408 aa)
              0.420
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (9%) [HD]