STRINGSTRING
Psed_5011 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5011" - LysR family transcriptional regulator in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5011LysR family transcriptional regulator (307 aa)    
Predicted Functional Partners:
Psed_3043
Formate dehydrogenase subunit alpha (942 aa)
 
          0.748
Psed_2507
LysR family transcriptional regulator (306 aa)
   
          0.668
Psed_4050
LysR family transcriptional regulator (279 aa)
   
          0.630
Psed_5012
Antibiotic biosynthesis monooxygenase (106 aa)
              0.583
Psed_3297
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit (626 aa)
         
  0.570
Psed_0035
TrwC relaxase (1465 aa)
   
          0.552
Psed_0351
LysR family transcriptional regulator (287 aa)
   
          0.541
Psed_4380
TrwC relaxase (1457 aa)
   
          0.514
Psed_3041
NADH dehydrogenase (ubiquinone) 24 kDa subunit (158 aa)
 
          0.485
Psed_5051
LysR family transcriptional regulator (300 aa)
   
          0.465
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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