STRINGSTRING
Psed_5025 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5025" - 4-hydroxyacetophenone monooxygenase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_50254-hydroxyacetophenone monooxygenase (493 aa)    
Predicted Functional Partners:
menC
Mandelate racemase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) (324 aa)
              0.859
Psed_5026
TetR family transcriptional regulator (203 aa)
              0.668
Psed_5027
FAD-binding 9 siderophore-interacting domain-containing protein (248 aa)
              0.592
Psed_1769
Xanthine permease (619 aa)
   
        0.553
Psed_3640
Hypothetical protein (109 aa)
 
     
  0.526
Psed_5022
D-lactate dehydrogenase (490 aa)
   
        0.479
Psed_5023
Amine oxidase (314 aa)
              0.472
Psed_0649
3-hydroxybutyryl-CoA epimerase (720 aa)
 
   
  0.466
Psed_5106
Radical SAM domain-containing protein (408 aa)
         
  0.458
Psed_0489
Alpha/beta hydrolase (302 aa)
   
  0.452
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (12%) [HD]