STRINGSTRING
Psed_5089 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5089" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5089Hypothetical protein (189 aa)    
Predicted Functional Partners:
Psed_5088
Hypothetical protein (265 aa)
 
        0.970
Psed_5090
Phosphomutase (232 aa)
 
        0.922
Psed_5649
Major facilitator superfamily protein (662 aa)
   
        0.743
Psed_3894
ErfK/YbiS/YcfS/YnhG family protein (423 aa)
   
          0.737
Psed_0597
ErfK/YbiS/YcfS/YnhG family protein (395 aa)
   
          0.729
Psed_0454
Hypothetical protein (99 aa)
   
          0.702
Psed_0964
Hypothetical protein (216 aa)
   
        0.677
Psed_5091
UDP-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin (273 aa)
   
        0.676
prcA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (267 aa)
   
        0.664
Psed_5207
F420-0-gamma-glutamyl ligase (454 aa)
 
          0.661
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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