STRINGSTRING
Psed_5112 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5112" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5112Hypothetical protein (274 aa)    
Predicted Functional Partners:
Psed_5113
F420-dependent oxidoreductase (346 aa)
              0.686
Psed_1275
Hypothetical protein (115 aa)
   
          0.683
Psed_5114
Phosphoglycerate mutase (205 aa)
              0.660
Psed_5111
o-succinylbenzoate--CoA ligase (519 aa)
              0.657
Psed_1271
Hypothetical protein (97 aa)
   
          0.632
Psed_2366
Hypothetical protein (320 aa)
 
          0.513
egtD
Methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine (330 aa)
 
          0.498
egtB
Hypothetical protein; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma- L-glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine (468 aa)
 
          0.490
Psed_1036
Asp/Glu/hydantoin racemase (255 aa)
   
          0.464
Psed_1035
Hypothetical protein (186 aa)
   
          0.464
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (8%) [HD]