STRINGSTRING
Psed_5138 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5138" - Antibiotic biosynthesis monooxygenase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5138Antibiotic biosynthesis monooxygenase (114 aa)    
Predicted Functional Partners:
Psed_5140
Hypothetical protein (57 aa)
              0.574
Psed_5139
Hypothetical protein (130 aa)
              0.574
Psed_0314
Hypothetical protein (239 aa)
   
          0.560
Psed_3511
Hypothetical protein (90 aa)
   
          0.559
Psed_6302
Hypothetical protein (245 aa)
   
          0.526
Psed_0615
Hypothetical protein (457 aa)
   
          0.469
Psed_4299
Major facilitator superfamily protein (408 aa)
   
        0.461
Psed_0640
Beta-lactamase domain-containing protein (208 aa)
 
        0.455
Psed_1956
FhuF/siderophore biosynthesis protein (289 aa)
   
          0.446
Psed_6522
Hypothetical protein (137 aa)
   
          0.445
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]