STRINGSTRING
Psed_5154 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5154" - Signal transduction histidine kinase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5154Signal transduction histidine kinase (499 aa)    
Predicted Functional Partners:
Psed_3880
Response regulator receiver and ANTAR domain-containing protein (209 aa)
 
     
  0.879
Psed_3055
Hypothetical protein (100 aa)
   
          0.742
Psed_5153
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (83 aa)
 
          0.717
Psed_3492
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (85 aa)
   
          0.711
Psed_1121
Hypothetical protein (514 aa)
   
        0.703
Psed_5647
Hypothetical protein (277 aa)
   
          0.651
Psed_6688
Single-stranded nucleic acid binding R3H domain-containing protein (174 aa)
 
          0.626
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (92 aa)
   
          0.610
prcA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (267 aa)
   
        0.587
Psed_2132
Hypothetical protein (162 aa)
   
          0.585
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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