STRINGSTRING
Psed_5181 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5181" - Phosphoribosyltransferase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5181Phosphoribosyltransferase (267 aa)    
Predicted Functional Partners:
Psed_5182
Lipoprotein LpqB, beta-propeller domain-containing protein (570 aa)
              0.676
Psed_3541
Aminodeoxychorismate lyase (750 aa)
   
      0.663
Psed_5180
Sigma 54 modulation protein/ribosomal protein S30EA (232 aa)
         
  0.646
Psed_2963
acetyl-CoA carboxylase (494 aa)
 
          0.605
Psed_5183
Histidine kinase (596 aa)
   
        0.581
Psed_4735
Hypothetical protein (118 aa)
 
        0.580
secA
Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (952 aa)
   
        0.559
Psed_3430
Riboflavin biosynthesis protein RibD (385 aa)
              0.542
Psed_4380
TrwC relaxase (1457 aa)
 
          0.528
Psed_3784
NAD(+) synthase (680 aa)
              0.518
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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