STRINGSTRING
Psed_5202 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5202" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5202Hypothetical protein (120 aa)    
Predicted Functional Partners:
Psed_5203
Hypothetical protein (159 aa)
 
          0.915
Psed_5199
Hypothetical protein (368 aa)
 
          0.826
Psed_5201
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II (451 aa)
 
          0.824
Psed_5198
Mannose-6-phosphate isomerase (405 aa)
 
          0.727
priA
Primosomal protein N’; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (686 aa)
   
          0.709
Psed_1711
Hypothetical protein (105 aa)
   
          0.702
Psed_2813
Hypothetical protein (95 aa)
   
          0.680
Psed_3162
Regulatory protein MerR (207 aa)
   
          0.636
Psed_3426
Hypothetical protein (305 aa)
   
          0.618
Psed_1397
TAP domain-containing protein (530 aa)
   
          0.615
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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