STRINGSTRING
Psed_5203 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5203" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5203Hypothetical protein (159 aa)    
Predicted Functional Partners:
Psed_5202
Hypothetical protein (120 aa)
 
          0.915
Psed_3426
Hypothetical protein (305 aa)
   
        0.753
Psed_2142
Hypothetical protein (144 aa)
   
          0.711
Psed_2776
Hypothetical protein; Exonuclease that cleaves single-stranded 3’ overhangs of double-stranded RNA (162 aa)
   
          0.694
Psed_2787
Hypothetical protein (204 aa)
   
        0.671
Psed_5201
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II (451 aa)
              0.662
Psed_5199
Hypothetical protein (368 aa)
 
          0.654
Psed_0162
Hypothetical protein (147 aa)
   
          0.637
Psed_3823
Hypothetical protein (334 aa)
   
          0.608
Psed_5336
Chorismate mutase (94 aa)
   
          0.602
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]