STRINGSTRING
Psed_5204 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5204" - Transcription factor WhiB in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Psed_5204Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (111 aa)    
Predicted Functional Partners:
Psed_5358
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (104 aa)
   
     
  0.810
Psed_6493
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (118 aa)
   
     
  0.802
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (92 aa)
   
          0.778
Psed_3492
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (85 aa)
   
          0.778
Psed_4736
Hypothetical protein (107 aa)
   
          0.777
Psed_3055
Hypothetical protein (100 aa)
   
          0.773
nucS
Hypothetical protein; Cleaves both 3’ and 5’ ssDNA extremities of branched DNA structures (219 aa)
   
          0.768
Psed_3162
Regulatory protein MerR (207 aa)
   
          0.766
Psed_1121
Hypothetical protein (514 aa)
   
          0.761
whiA
Sporulation transcriptional regulator whiA; May be required for sporulation (327 aa)
   
     
  0.759
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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