STRINGSTRING
Psed_5205 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5205" - Peptidase M50 in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5205Peptidase M50 (250 aa)    
Predicted Functional Partners:
Psed_5204
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (111 aa)
              0.613
Psed_1097
UvrD/REP helicase (1224 aa)
              0.569
Psed_1096
UvrD/REP helicase (1106 aa)
              0.569
Psed_5351
Inosine-5’-monophosphate dehydrogenase (501 aa)
              0.561
Psed_0954
IMP dehydrogenase (483 aa)
              0.561
Psed_4738
Signal peptidase I (430 aa)
 
   
  0.538
Psed_4803
Hypothetical protein (221 aa)
   
          0.525
Psed_3807
Pseudouridine synthase (252 aa)
 
        0.515
Psed_3808
Chromosome segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (258 aa)
 
          0.487
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (499 aa)
 
          0.486
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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