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Psed_5210 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5210" - 3-methyl-adenine DNA glycosylase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_52103-methyl-adenine DNA glycosylase (305 aa)    
Predicted Functional Partners:
Psed_5211
Mannose-1-phosphate guanylyltransferase (372 aa)
              0.881
Psed_5212
Glycosyltransferase (251 aa)
              0.859
Psed_5310
Exodeoxyribonuclease III (268 aa)
   
  0.854
Psed_1105
Exodeoxyribonuclease III (289 aa)
   
  0.854
Psed_0431
Beta-lactamase domain-containing protein (234 aa)
 
          0.765
Psed_5209
Peroxiredoxin (175 aa)
   
        0.690
Psed_1652
Hypothetical protein (659 aa)
   
        0.688
Psed_3283
5’-3’ exonuclease (312 aa)
 
 
  0.676
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (347 aa)
     
 
  0.663
Psed_4804
Thioesterase (139 aa)
   
        0.658
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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