STRINGSTRING
Psed_5216 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5216" - Hypothetical protein in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5216Hypothetical protein (238 aa)    
Predicted Functional Partners:
Psed_5215
Cell envelope-related transcriptional attenuator (541 aa)
   
        0.853
Psed_3867
Hypothetical protein (166 aa)
   
        0.727
Psed_0164
Hypothetical protein (275 aa)
   
          0.698
Psed_1528
Anti-sigma factor (150 aa)
   
          0.685
Psed_6643
Hypothetical protein (207 aa)
   
          0.675
Psed_1783
vitamin-B12 independent methionine synthase (421 aa)
   
        0.648
ilvA
Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (411 aa)
              0.636
Psed_4708
GCN5-like N-acetyltransferase (277 aa)
   
        0.634
Psed_2115
Hypothetical protein (700 aa)
   
          0.629
Psed_5623
Glutaredoxin 2 (80 aa)
   
          0.619
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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