STRINGSTRING
Psed_5298 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5298" - Integral membrane protein MviN in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5298Integral membrane protein MviN (673 aa)    
Predicted Functional Partners:
Psed_0120
FHA domain-containing protein (412 aa)
   
 
 
  0.872
Psed_3160
FHA domain-containing protein (148 aa)
   
 
      0.870
Psed_0119
FHA domain-containing protein (152 aa)
   
 
      0.781
Psed_0117
Cell cycle protein (487 aa)
 
   
  0.726
Psed_2800
Penicillin-binding protein transpeptidase (928 aa)
 
      0.705
Psed_0116
Peptidoglycan glycosyltransferase (489 aa)
 
      0.698
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (356 aa)
 
 
  0.678
Psed_2805
Cell division protein FtsW (457 aa)
 
   
  0.654
Psed_0056
Cell division protein FtsW (595 aa)
 
   
  0.647
Psed_3872
RNA binding S1 domain-containing protein (487 aa)
 
          0.615
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (9%) [HD]