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Psed_5305 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5305" - F420-dependent oxidoreductase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5305F420-dependent oxidoreductase (320 aa)    
Predicted Functional Partners:
Psed_5304
o-succinylbenzoate--CoA ligase (543 aa)
 
          0.904
Psed_5303
9-cis-epoxycarotenoid dioxygenase (483 aa)
 
          0.837
Psed_5506
Luciferase-like protein (334 aa)
   
          0.728
Psed_1371
F420-dependent oxidoreductase (315 aa)
   
          0.674
Psed_1331
LPPG-FO 2-phospho-L-lactate transferase (323 aa)
   
          0.671
Psed_1473
F420-dependent oxidoreductase (309 aa)
   
          0.650
Psed_5208
LPPG-FO 2-phospho-L-lactate transferase (335 aa)
   
          0.607
Psed_0192
Nitroreductase (221 aa)
   
          0.590
Psed_2238
F420-dependent oxidoreductase (275 aa)
   
          0.583
Psed_1379
F420-dependent oxidoreductase (304 aa)
   
          0.574
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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