STRINGSTRING
Psed_5312 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5312" - Isocitrate dehydrogenase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5312Isocitrate dehydrogenase (404 aa)    
Predicted Functional Partners:
Psed_5115
2-oxoglutarate dehydrogenase E1 (1263 aa)
   
 
  0.977
Psed_3377
Aconitate hydratase 1 (939 aa)
   
  0.965
Psed_5549
2-oxoacid-acceptor oxidoreductase subunit alpha (647 aa)
       
  0.934
Psed_4566
2-oxoglutarate dehydrogenase E2 (614 aa)
   
 
  0.933
Psed_1955
Glutamate synthase (1522 aa)
   
 
  0.924
Psed_5550
2-oxoglutarate synthase (366 aa)
       
  0.904
Psed_2303
Glutamate dehydrogenase (445 aa)
     
  0.881
Psed_2085
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (430 aa)
   
 
  0.876
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (328 aa)
   
 
  0.874
Psed_6012
Aspartate transaminase (391 aa)
   
 
  0.855
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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