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dnaE2 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"dnaE2" - Error-prone DNA polymerase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaE2Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase (1142 aa)    
Predicted Functional Partners:
Psed_0348
DNA polymerase III subunits gamma and tau (829 aa)
   
  0.982
Psed_0002
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (376 aa)
     
  0.969
Psed_2761
DNA polymerase III subunit epsilon (586 aa)
 
  0.964
Psed_6489
DNA polymerase III subunit delta’ (383 aa)
 
  0.956
Psed_2012
DNA polymerase III subunit delta (342 aa)
     
  0.943
Psed_5323
Hypothetical protein (735 aa)
 
   
  0.891
Psed_3588
DNA polymerase I (939 aa)
   
 
  0.876
Psed_5324
Hypothetical protein (254 aa)
 
          0.863
Psed_6654
Single-strand binding protein (175 aa)
   
 
  0.812
Psed_4808
Single-strand binding protein (185 aa)
   
 
  0.811
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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