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Psed_5322 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5322" - (S)-2-hydroxy-acid oxidase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5322(S)-2-hydroxy-acid oxidase (415 aa)    
Predicted Functional Partners:
Psed_6027
Pyruvate dehydrogenase (604 aa)
   
 
  0.922
Psed_3473
Pyruvate dehydrogenase (588 aa)
   
 
  0.922
Psed_2427
Acetolactate synthase (601 aa)
   
 
  0.922
Psed_4769
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second (1125 aa)
   
 
  0.919
Psed_2869
Pyruvate kinase (472 aa)
     
 
  0.918
Psed_3075
Pyruvate dehydrogenase (358 aa)
   
 
  0.911
Psed_6609
Pyruvate dehydrogenase (324 aa)
   
 
  0.910
Psed_3076
Pyruvate dehydrogenase (331 aa)
   
 
  0.910
Psed_6610
Pyruvate dehydrogenase E1 component subunit alpha (415 aa)
   
 
  0.909
Psed_4974
Pyruvate dehydrogenase (337 aa)
   
 
  0.909
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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