STRINGSTRING
Psed_5323 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5323" - Hypothetical protein in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5323Hypothetical protein (735 aa)    
Predicted Functional Partners:
Psed_3588
DNA polymerase I (939 aa)
   
  0.980
Psed_5324
Hypothetical protein (254 aa)
 
          0.979
Psed_0002
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (376 aa)
     
  0.959
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (347 aa)
   
  0.930
dnaE2
Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase (1142 aa)
 
   
  0.891
Psed_3283
5’-3’ exonuclease (312 aa)
   
  0.883
Psed_4718
ATP dependent DNA ligase (356 aa)
 
 
  0.877
Psed_6489
DNA polymerase III subunit delta’ (383 aa)
 
  0.876
Psed_3272
DNA polymerase LigD, polymerase domain-containing protein (661 aa)
 
 
  0.875
Psed_6303
ATP-dependent DNA ligase (118 aa)
 
 
  0.870
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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