STRINGSTRING
sucC protein (Pseudonocardia dioxanivorans) - STRING interaction network
"sucC" - succinyl-CoA ligase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sucCsuccinyl-CoA ligase (ADP-forming) subunit beta (390 aa)    
Predicted Functional Partners:
Psed_5331
succinyl-CoA synthetase subunit alpha (295 aa)
  0.999
Psed_5115
2-oxoglutarate dehydrogenase E1 (1263 aa)
 
  0.999
Psed_6280
Protein FdrA (513 aa)
   
  0.999
Psed_4566
2-oxoglutarate dehydrogenase E2 (614 aa)
   
  0.995
Psed_3712
Dihydrolipoyllysine-residue acetyltransferase (485 aa)
   
  0.990
Psed_4590
Succinate dehydrogenase (ubiquinone) (648 aa)
 
  0.989
Psed_4589
Succinate dehydrogenase and fumarate reductase iron-sulfur protein (256 aa)
 
  0.986
Psed_4593
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit (647 aa)
 
  0.985
Psed_6608
Dihydrolipoyllysine-residue acetyltransferase (472 aa)
   
  0.983
Psed_3077
Dihydrolipoyllysine-residue acetyltransferase (448 aa)
   
  0.983
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]