STRINGSTRING
Psed_5437 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5437" - long-chain-fatty-acid--CoA ligase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5437long-chain-fatty-acid--CoA ligase (562 aa)    
Predicted Functional Partners:
Psed_3998
long-chain-acyl-CoA dehydrogenase (383 aa)
   
 
  0.960
Psed_6600
acyl-CoA dehydrogenase (619 aa)
   
 
  0.957
Psed_4004
acyl-CoA dehydrogenase (600 aa)
   
 
  0.957
Psed_0899
acyl-CoA dehydrogenase (704 aa)
   
 
  0.957
Psed_5257
acyl-CoA dehydrogenase (443 aa)
   
 
  0.956
Psed_1380
acyl-CoA dehydrogenase (429 aa)
   
 
  0.956
Psed_0731
acyl-CoA dehydrogenase (442 aa)
   
 
  0.956
Psed_0729
acyl-CoA dehydrogenase (436 aa)
   
 
  0.956
Psed_0929
acyl-CoA dehydrogenase (408 aa)
   
 
    0.912
Psed_4007
acyl-CoA dehydrogenase (409 aa)
       
  0.903
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (11%) [HD]