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Psed_5474 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5474" - 4-coumarate--CoA ligase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_54744-coumarate--CoA ligase (556 aa)    
Predicted Functional Partners:
Psed_5473
Linalool 8-monooxygenase (428 aa)
   
   
  0.892
Psed_2766
long-chain-fatty-acid--CoA ligase (603 aa)
 
 
0.890
Psed_0133
long-chain-fatty-acid--CoA ligase (604 aa)
 
 
0.879
Psed_1607
o-succinylbenzoate--CoA ligase (506 aa)
   
   
 
0.855
Psed_5624
long-chain-fatty-acid--CoA ligase (542 aa)
   
   
 
0.849
Psed_5437
long-chain-fatty-acid--CoA ligase (562 aa)
   
   
 
0.845
Psed_1587
long-chain-fatty-acid--CoA ligase (497 aa)
   
   
 
0.827
Psed_0649
3-hydroxybutyryl-CoA epimerase (720 aa)
   
 
  0.789
Psed_2922
o-succinylbenzoate--CoA ligase (528 aa)
 
     
  0.766
Psed_6207
butyryl-CoA dehydrogenase (387 aa)
 
   
  0.624
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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