STRINGSTRING
Psed_5478 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5478" - Hypothetical protein in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5478Hypothetical protein (136 aa)    
Predicted Functional Partners:
Psed_5479
Beta-lactamase (409 aa)
              0.662
Psed_5480
Small multidrug resistance protein (106 aa)
              0.549
Psed_4362
Vitamin K epoxide reductase (207 aa)
   
          0.459
Psed_5720
Phage shock protein C, PspC (99 aa)
         
  0.429
Psed_5481
Patatin (338 aa)
              0.416
Psed_5345
Methylenetetrahydrofolate reductase (309 aa)
              0.412
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (733 aa)
              0.412
lgt
Prolipoprotein diacylglyceryl transferase; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (352 aa)
              0.412
Psed_2785
5,10-methylenetetrahydrofolate reductase (300 aa)
              0.412
Psed_2107
Methionine synthase (603 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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