STRINGSTRING
Psed_5491 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5491" - Dual specificity protein phosphatase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5491Dual specificity protein phosphatase (154 aa)    
Predicted Functional Partners:
Psed_5492
protein-(glutamine-N5) methyltransferase (258 aa)
 
          0.705
Psed_5544
Hypothetical protein (185 aa)
   
          0.667
Psed_5232
Hypothetical protein (506 aa)
   
          0.619
Psed_2762
Hypothetical protein (465 aa)
 
          0.604
Psed_2793
Type 12 methyltransferase (235 aa)
   
          0.582
Psed_3008
Hypothetical protein (460 aa)
   
          0.559
Psed_6309
Hypothetical protein (303 aa)
   
          0.549
Psed_3412
Hypothetical protein (129 aa)
   
          0.541
Psed_4091
ABC transporter substrate-binding protein (583 aa)
   
          0.538
Psed_4506
Hypothetical protein (58 aa)
   
          0.521
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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