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Psed_5516 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5516" - Fur family ferric uptake regulator in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5516Fur family ferric uptake regulator (143 aa)    
Predicted Functional Partners:
Psed_5515
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (739 aa)
   
   
  0.879
Psed_0449
Fur family ferric uptake regulator (159 aa)
   
          0.707
Psed_4106
Catalase (505 aa)
 
   
  0.687
Psed_2714
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (775 aa)
   
   
  0.518
Psed_6095
Fe(3+)-transporting ATPase (282 aa)
   
   
  0.516
Psed_3038
Sulfate-transporting ATPase (252 aa)
   
   
  0.516
Psed_0654
ABC transporter (302 aa)
   
   
  0.516
Psed_0733
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (731 aa)
   
   
  0.515
Psed_6096
ABC transporter permease (292 aa)
   
   
  0.506
Psed_3039
ABC transporter permease (294 aa)
   
   
  0.506
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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